Publications

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Found 151 results
2011
S. Simon, Oelke, D., Landstorfer, R., Neuhaus, K., and Keim, D. A., Visual analysis of next-generation sequencing data to detect overlapping genes in bacterial genomes, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
P. Livengood, Maciejewski, R., Chen, W., and Ebert, D. S., A visual analysis system for metabolomics data, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
S. Johansson Fernstad, Johansson, J., Adams, S., Shaw, J., and Taylor, D., Visual exploration of microbial populations, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
C. Vehlow, Preim, B., and Lappe, M., Visualization of anisotropic contact potentials within protein structures, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
M. Correll, Ghosh, S., O'Connor, D., and Gleicher, M., Visualizing virus population variability from next generation sequencing data, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
2010
S. Bremm, Schreck, T., Boba, P., Held, S., and Hamacher, K., Computing and Visually Analyzing Mutual Information in Molecular Co-evolution, BMC Bioinformatics, vol. 11:330, 2010.
I. Milne, Shaw, P. D., Stephen, G., Bayer, M., Cardle, L., Thomas, W. T. B., Flavell, A. J., and Marshall, D., Flapjack--graphical genotype visualization, Bioinformatics, vol. 26, no. 24, pp. 3133 - 3134, 2010.
A. Bezerianos, Dragicevic, P., Fekete, J. - D., Bae, J., and Watson, B., GeneaQuilts: A System for Exploring Large Genealogies, IEEE Transactions on Visualization and Computer Graphics, vol. 16, no. 6, pp. 1073 - 1081, 2010.
T. M. O'Brien, Ritz, A. M., Raphael, B. J., and Laidlaw, D. H., Gremlin: An Interactive Visualization Model for Analyzing Genomic Rearrangements, IEEE Transactions on Visualization and Computer Graphics, vol. 16, no. 6, pp. 918 - 926, 2010.
P. Craig, Kennedy, J., Kukla, R., and Cannon, A., Pattern Browsing and Query Adjustment for the Exploratory Analysis and Cooperative Visualisation of Microarray Time-course Data, in Proceedings of the 7th International Conference on Cooperative Design, Visualisation and Engineering, vol. 6240/2010, Y. Luo Mallorca, Spain: Lecture Notes in Computer Science, 2010, pp. 199-206.
C. Tuttle, Nonato, L. G., and Silva, C., PedVis: A Structured, Space-Efficient Technique for Pedigree Visualization, IEEE Transactions on Visualization and Computer Graphics, vol. 16, no. 6, pp. 1063 - 1072, 2010.
2004
W. Ludwig, Strunk, O., Westram, R., Richter, L., Meier, H., Buchner, A., Lai, T., Steppi, S., Jobb, G., Förster, W., and , ARB: a software environment for sequence data, Nucleic acids research, vol. 32, pp. 1363–1371, 2004.
A. Cannon, Kennedy, J., Paterson, T., and Watson, M., Ontology-Driven Automated Generation Of Data Entry Interfaces, in Key Technologies for Data Management (Proc. BNCOD21): Lecture Notes in Computer Science 3112, H. Williams and Mackinnon, L. Springer-Verlag, 2004, pp. 150-164.
J. Slack, Hildebrand, K., Munzner, T., and St John, K., SequenceJuxtaposer: Fluid Navigation For Large-Scale Sequence Comparison In Context, in German Conference on Bioinformatics, Bielefeld, Germany, 2004.
E. F. Pettersen, Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E., UCSF Chimera: A visualization system for exploratory research and analysis, Journal of Computational Chemistry, vol. 25, no. 13, pp. 1605 - 1612, 2004.
C. Parr, Lee, B., Campbell, D., and Bederson, B., Visualizations for taxonomic and phylogenetic trees, Bioinformatics, vol. 20, no. 17, 2004.
2003
T. Munzner, Guimbretiere, F., Tasiran, S., Zhang, L., and Zhou, Y., TreeJuxtaposer, ACM Transactions on Graphics, vol. 22, no. 3, p. 453, 2003.
2000
H. M. Berman, Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E., The Protein Data Bank, Nucleic Acids Research, vol. 28, no. 1, pp. 235 - 242, 2000.

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