xiNET

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Cross-link network maps with residue resolution

Matthew Dunn
Juri Rappsilber

xiNET is a visualization tool for exploring cross-linking/mass spectrometry results. The interactive maps of the cross-link network that it generates are a type of node-link diagram. In these maps xiNET displays: (1) residue resolution positional information including linkage sites and linked peptides; (2) all types of cross-linking reaction product; (3) ambiguous results; and, (4) additional sequence information such as domains. xiNET runs in a browser and exports vector graphics which can be edited in common drawing packages to create publication quality figures.

Release Date:
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Techniques:
2D, Network / hierarchy graph
Software:
Installed, Web based
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Platform:
Linux, Mac OSX, Windows
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Project development

Institution: Rappsilber Laboratory, The University of Edinburgh