Visualisation Tools

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This is a collection of many of the most notable visualisation tools produced by biologists and visualisation researchers. If you have a tool you would like to see here, please register and you will be able to add your visualisation tool to the site or contact us for more advice.

HaptiMOL
Molecular
Reactome
Pathway
Supramap
Genome
Epiviz
Genome
VisRseq
Genome
expVIP
Genome
iobio
Genome
Aquaria
Molecular
Annotools
Genome
NinjaViewer
Genome
Gene Expression Commons
Genome
RCSB Protein Data Bank
Molecular
GenomeCRISPR
Genome
Hi-C Explorer
Genome
cellVIEW
Molecular
I-PV
Mango
Genome
ClearVolume
SynTView
Genome
PlantGenIE
Genome
MegaMol
Molecular
XCluSim
Genome
Pan-Tetris
Genome
IBM UKSC history
Molecular
Molecular Maya
Molecular
Integrated Genome Browser
Genome
Sequence Bundles
Genome
GraphiteLifeExplorer
Molecular
Biopython KGML module
Pathway
GenomeDiagram
Genome
MI-MatrixExplorer
Genome, Phylogenetics
Paramorama: visual parameter optimisation for biomedical image processing
Cells and Organisms
Orchestral
Genome
Leeds Virtual Microscope
OMERO
Cell-o-pane: a cell lineage visualisation tool
Cells and Organisms, Molecular
FoldSynth
Molecular
Sequence logo viewer
Genome
Aequatus Browser
Genome
TGAC Browser
Genome
Ensembl Genome Browser
Genome
Pathline
Pathway
SequenceJuxtaposer
Genome
NN-tanglegram
Phylogenetics
Pipit
Genome
Zomit
Genome
ArkMAP
Genome
GenotypeChecker
Genome, Populations
TaxonTree
Phylogenetics
Gremlin
Genome
TreeJuxtaposer
Phylogenetics
Flapjack
Genome
MizBee
Genome
BioFabric
Pathway
Dendroscope
Phylogenetics
Variant View
Genome
GeneaQuilts
Populations
Strudel
Genome
HerbariaViz
Populations
Circos
Genome
Pseudoviewer 3
Genome, Molecular
StratomeX
Genome
Tableau
Genome
BioLayout Express3D
Cells and Organisms, Genome, Pathway
Assemble2
Molecular
UCSC Genome Browser
Genome
MembraneEditor
Cells and Organisms
UCSF Chimera
Molecular
MolViewer
Molecular
Voreen
Pathway
MIMTool
Molecular
Sunburst view of in situ gene-expression data from EMAGE
Anatomy, Physiology and Atlases, Genome
Polymerization Illustration
Molecular
inPHAP
Genome
OmicsVis
Molecular
Morphometric Visualisation
Anatomy, Physiology and Atlases
TIALA
Genome
NGS Overlap Searcher
Genome
Galaxy Track Browser
Genome
GPGPU-based Contour Surfaces
Molecular
Physioillustration: Interactive molecular illustration
Anatomy, Physiology and Atlases, Molecular
enRoute
Pathway
Dynamic Biomolecular Path Viz
Molecular
Epithelial Volume Viz
Anatomy, Physiology and Atlases
mzRepeat
Molecular
Gene-RiViT
Genome, Populations
Electron Microscopy Visualisation
Anatomy, Physiology and Atlases
GVF Alignment Viz
Genome, Molecular
COMBat
Genome
MoClo Planner
Genome, Molecular