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R. F. Schwarz, Tamuri, A. U., Kultys, M., King, J., Godwin, J., Florescu, A. M., Schultz, örg, and Goldman, N., ALVIS: interactive non-aggregative visualization and explorative analysis of multiple sequence alignments, Nucleic Acids Research, vol. 44, no. 8, pp. e77 - e77, 2016.
T. Höllt, Pezzotti, N., van Unen, V., Koning, F., Eisemann, E., Lelieveldt, B. P. F., and Vilanova, A., Cytosplore: Interactive Immune Cell Phenotyping for Large Single-Cell Datasets, Computer Graphics Forum (Proc. of EuroVis), vol. 35, 2016.
J. Heinrich, Vuong, J., Hammang, C. J., Wu, A., Rittenbruch, M., Hogan, J., Brereton, M., and O’Donoghue, S. I., Evaluating viewpoint entropy for ribbon representation of protein structure, Computer Graphics Forum (Proc. of EuroVis), vol. 35, no. 3, 2016.
P. Borrill, Ramirez-Gonzalez, R., and Uauy, C., expVIP: a Customizable RNA-seq Data Analysis and Visualization Platform, Plant Physiology, vol. 170, no. 4, pp. 2172 - 2186, 2016.
J. Sorger, Mindek, P., Klein, T., Johnson, G., and Viola, I., Illustrative Transitions in Molecular Visualization via Forward and Inverse Abstraction Transform, in Eurographics Workshop on Visual Computing for Biology and Medicine, 2016.
M. Riveiro, Lebram, M., Andersson, C. X., Sartipy, P., and Synnergren, J., Interactive Visualization of Large-Scale Gene Expression Data, in Information Visualisation (IV), 2016 20th International Conference , Lisbon, Portugal, 2016.
I. Tanyalcin, Assaf, C. Al, Gheldof, A., Stouffs, K., Lissens, W., and Jansen, A. C., I-PV: a CIRCOS module for interactive protein sequence visualization, Bioinformatics, vol. 32, no. 3, pp. 447 - 449, 2016.
A. Fabregat, Sidiropoulos, K., Garapati, P., Gillespie, M., Hausmann, K., Haw, R., Jassal, B., Jupe, S., Korninger, F., McKay, S., Matthews, L., May, B., Milacic, M., Rothfels, K., Shamovsky, V., Webber, M., Weiser, J., Williams, M., Wu, G., Stein, L., Hermjakob, H., and D'Eustachio, P., The Reactome pathway Knowledgebase, Nucleic Acids Research, vol. 44, no. D1, pp. D481 - D487, 2016.
M. Krone, Kozlikova, B., Lindow, N., Baaden, M., Baum, D., Parulek, J., Hege, H. - C., and Viola, I., Visual Analysis of Biomolecular Cavities: State of the Art, Computer Graphics Forum, vol. 35, no. 3, pp. 527 - 551, 2016.
J. Sansen, Thebault, P., Dutour, I., and Bourqui, R., Visualization of sRNA-mRNA Interaction Predictions, in Information Visualisation (IV), 2016 20th International Conference , Lisbon, Portugal, 2016.
A. Sarikaya, Correll, M., Dinis, J. M., O’Connor, D. H., and Gleicher, M., Visualizing Co-occurrence of Events in Populations of Viral Genome Sequences, Computer Graphics Forum (Proc. of EuroVis), vol. 35, no. 3, 2016.
G. Iakovou, Hayward, S., and Laycock, S. D., Adaptive GPU-accelerated force calculation for interactive rigid molecular docking using haptics, Journal of Molecular Graphics and Modelling, vol. 61, pp. 1 - 12, 2015.
ánI. O'Donoghue, Sabir, K. S., Kalemanov, M., Stolte, C., Wellmann, B., Ho, V., Roos, M., o, Nã, Buske, F. A., Heinrich, J., Rost, B., and Schafferhans, A., Aquaria: simplifying discovery and insight from protein structures, Nature Methods, vol. 12, no. 2, pp. 98 - 99, 2015.
J. Aurisano, Reda, K., Johnson, A., Marai, E. G., and Leigh, J., BactoGeNIE: a large-scale comparative genome visualization for big displays, BMC bioinformatics, vol. 16, p. S6, 2015.
L. A. Royer, Weigert, M., Günther, U., Maghelli, N., Jug, F., Sbalzarini, I. F., and Myers, E. W., ClearVolume: open-source live 3D visualization for light-sheet microscopy, Nature Methods, vol. 12, no. 6, pp. 480 - 481, 2015.
F. Chelaru and Bravo, H. Corrada, Epiviz: a view inside the design of an integrated visual analysis software for genomics, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S4, 2015.
H. Ding, Wang, C., Huang, K., and Machiraju, R., GRAPHIE: graph based histology image explorer, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S10, 2015.
C. Stolte, Sabir, K. S., Heinrich, J., Hammang, C. J., Schafferhans, A., and O'Donoghue, ánI., Integrated visual analysis of protein structures, sequences, and feature data, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S7, 2015.
S. Grottel, Krone, M., Müller, C., Reina, G., and Ertl, T., MegaMol—A Prototyping Framework for Particle-Based Visualization, IEEE Transactions on Visualization and Computer Graphics, vol. 21, no. 2, pp. 201 - 214, 2015.
A. Hennig, Bernhardt, J., and Nieselt, K., Pan-Tetris: an interactive visualisation for Pan-genomes, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S3, 2015.
M. Abdellah, Bilgili, A., Eilemann, S., Markram, H., and rmann, Fü, Physically-based in silico light sheet microscopy for visualizing fluorescent brain models, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S8, 2015.
D. Sundell, Mannapperuma, C., Netotea, S., Delhomme, N., Lin, Y. - C., Sjödin, A., Van de Peer, Y., Jansson, S., Hvidsten, T. R., and Street, N. R., The Plant Genome Integrative Explorer Resource:, New Phytologist, vol. 208, no. 4, pp. 1149 - 1156, 2015.
H. Younesy, ller, Tö, Lorincz, M. C., Karimi, M. M., and Jones, S. J. M., VisRseq: R-based visual framework for analysis of sequencing data, BMC Bioinformatics, vol. 16, no. Suppl 11, p. S2, 2015.