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2013
Pde Heras Ciechomski, Klann, M., Mange, R., and Koeppl, H., “From biochemical reaction networks to 3D dynamics in the cell: The ZigCell3D modeling, simulation and visualisation framework”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
J. Dubois, Ghozlane, A., Thebault, P., Dutour, I., and Bourqui, R., “Genome-wide detection of sRNA targets with rNAV”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
K. Wu, Chen, J., Pruett, W. A., and Hester, R. L., “Hummod browser: An exploratory visualization tool for the analysis of whole-body physiology simulation data”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
C. Demiralp, Hayden, E., Hammerbacher, J., and Heer, J., “invis: Exploring high-dimensional RNA sequences from in vitro selection”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
K. Tan Nguyen and Ropinski, T., “Large-scale multiple sequence alignment visualization through gradient vector flow analysis”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
J. Sorger, Buhler, K., Schulze, F., Liu, T., and Dickson, B., “neuroMAP — Interactive graph-visualization of the fruit fly's neural circuit”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
C. Nowke, Schmidt, M., van Albada, S. J., Eppler, J. M., Bakker, R., Diesrnann, M., Hentschel, B., and Kuhlen, T., “VisNEST — Interactive analysis of neural activity data”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
J. Kennedy, Graham, M., Paterson, T., and Law, A., “Visual cleaning of genotype data”, in 2013 IEEE Symposium on Biological Data Visualization (BioVis)2013 IEEE Symposium on Biological Data Visualization (BioVis), Atlanta, GA, USA, 2013.
2012
S. A. Silveira, Rodrigues, A. O., de Melo-Minardi, R. C., da Silveira, C. Henrique, and Meira, W., “ADVISe: Visualizing the dynamics of enzyme annotations in UniProt/Swiss-Prot”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
N. Lindow, Baum, D., Bondar, A. - N., and Hege, H. - C., “Dynamic channels in biomolecular systems: Path analysis and visualization”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
C. Partl, Kalkofen, D., Lex, A., Kashofer, K., Streit, M., and Schmalstieg, D., “enRoute: Dynamic path extraction from biological pathway maps for in-depth experimental data analysis”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
A. Price, Kosara, R., and Gibas, C., “Gene-RiViT: A visualization tool for comparative analysis of gene neighborhoods in prokaryotes”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
Y. Wan, Otsuna, H., Bin Chien, C. -, and Hansen, C., “Interactive extraction of neural structures with user-guided morphological diffusion”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis 2012)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, 2012.
J. Fangerau, Hockendorf, B., Wittbrodt, J., and Leitte, H., “Similarity analysis of cell movements in video microscopy”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
C. Vehlow, Hasenauer, J., Kramer, A., Heinrich, J., Radde, N., Allgower, F., and Weiskopf, D., “Uncertainty-aware visual analysis of biochemical reaction networks”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
R. Heiland, Shirinifard, A., Swat, M., Thomas, G. L., Sluka, J., Lumsdaine, A., Zaitlen, B., and Glazier, J. A., “Visualizing cells and their connectivity graphs for CompuCell3D”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
D. Mayerich and Hart, J. C., “Volume visualization in serial electron microscopy using local variance”, in 2012 IEEE Symposium on Biological Data Visualization (BioVis)2012 IEEE Symposium on Biological Data Visualization (BioVis), Seattle, WA, USA, 2012.
2011
N. Ferreira, Lins, L., Fink, D., Kelling, S., Wood, C., Freire, J., and Silva, C., “BirdVis: Visualizing and Understanding Bird Populations”, IEEE Transactions on Visualization and Computer Graphics, vol. 17, no. 12, pp. 2374 - 2383, 2011.
T. Paterson, Graham, M., Kennedy, J., and Law, A., “Evaluating the VIPER pedigree visualisation: Detecting inheritance inconsistencies in genotyped pedigrees”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
R. Miller, Mozhayskiy, V., Tagkopoulos, L., and Ma, K. - L., “EVEVis: A multi-scale visualization system for dense evolutionary data”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
M. Goldau, Wiebel, A., Gorbach, N. Stephan, Melzer, C., Hlawitschka, M., Scheuermann, G., and Tittgemeyer, M., “Fiber stippling: An illustrative rendering for probabilistic diffusion tractography”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
J. Goecks, Li, K., Clements, D., Team, T. Galaxy, and Taylor, J., “The Galaxy Track Browser: Transforming the genome browser from visualization tool to analysis tool”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
R. E. Curtis, Kinnaird, P., and Xing, E. P., “GenAMap: Visualization strategies for structured association mapping”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
R. Patro, Ip, C. Yiu, Bista, S., Thirumalai, D., Cho, S. S., and Varshney, A., “MDMap: A system for data-driven layout and exploration of molecular dynamics simulations”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.
M. Falk, Daub, M., Schneider, G., and Ertl, T., “Modeling and visualization of receptor clustering on the cellular membrane”, in 2011 IEEE Symposium on Biological Data Visualization (BioVis)2011 IEEE Symposium on Biological Data Visualization (BioVis)., Providence, RI, USA, 2011.

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