Biopython KGML module

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Publication-quality modification and visualisation of KEGG pathways

Kevin Wu
Peter Cock

The Biopython KGML and KEGG modules provide a programmatic interface for downloading, modifying and rendering visualisations of KEGG database pathways at publication quality. The KEGG module provides support for KEGG's REST API, and the KGML module provides parsing support for the KGML exchange format, and control over pathway element visual properties (colour, size, labelling, etc.).

 

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December, 2014
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Project development

Institution: James Hutton Institute