enRoute

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enRoute: Dynamic path extraction from biological pathway maps for in-depth experimental data analysis

enRoute is a new approach for interactively exploring experimental data along paths that are dynamically extracted from pathways. By showing an extracted path side-by-side with experimental data, enRoute can present large amounts of data for every pathway node. It can visualize hundreds of samples, dozens of experimental conditions, and even multiple datasets capturing different aspects of a node at the same time. Another important property of this approach is its conceptual compatibility with arbitrary forms of pathways. Most notably, enRoute works well with pathways that are manually created, as they are available in large, public pathway databases.

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Technology:
Caleydo software
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Windows

Project development

Institution: Graz University of Technology, Johannes Kepler University Linz, Medical University of Graz

This work is supported by the following grants: Caleydoplex (P22902, FWF), Tumorheterogeneity (GZ:A3–22.M-5/2012–21, state of Styria), IM-GuS (Austria Wirtschaftsservice), and inGeneious (385567, FFG).