EpiTools

You are here

Image Processing Software for Epithelial Tissue

Davide Heller
Alexander Tournier
Lorenzo Gatti
Andreas Hoppe
Simon Restrepo
Nicolas Tapon
Konrad Basler
Yanlan Mao

EpiTools provides user-friendly graphical user interfaces for accurately segmenting and tracking the contours of cell membrane signals obtained from 4D confocal imaging. It is designed for a broad audience, especially biologists with no computer-science background. Quantitative data extraction is integrated into a larger bioimaging platform, Icy, to increase the visibility and usability of thetools.

Release Date:
Status:
Availability:
Data type:
Techniques:
2D, Network / hierarchy graph, Spatial representation
Software:
Installed, Package or library
Technology:
Platform:
Linux, Mac OSX, Windows
Requirements:
Matlab 2014a

Project development

Institution: UZH, Zurich, Switzerland; ZHAW, Zurich, Switzerland; SIB, Lausanne, Switzerland; UCL, London, United Kingdom; Kingston University, Kingston, United Kingdom; Cancer Research UK, London, United Kingdom