iobio

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Themes:
Genome

Real-time Genomic Analysis

Dr. Alistair Ward
Prof. Gabor Marth
Dr. Chase Miller
Tony DiSera
Dr. Yi Qiao
Dr. Matt Velinder

iobio uses immediate visual feedback to make understanding complex genomic datasets more intuitive, and analysis more interactive.  Applications include:

  • gene.iobio.io: a web app for investigating potential disease-causing variants
  • taxonomer.iobio.io: an ultra fast metagenomics classification and analysis app
  • bam.iobio.io: an alignment data inspector tool that quickly samples bam files and visualizes a series of metrics
  • vcf.iobio.io: a variant data inspector tool that quickly samples vcf files and visualizes a series of metrics
Release Date:
Status:
Actively maintained
Availability:
Free, Open source
Data type:
Genome
Techniques:
2D, Network / hierarchy graph
Software:
Package or library, Web based
Technology:
JavaScript
Platform:
Linux, Mac OSX, Windows
Requirements:

Project development

Institution: Marth lab, USTAR Center for Genetic Discovery, University of Utah

Submitted by Natalie Kerracher on Fri, 03/02/2017 - 14:01
Last updated on 9th February, 2017