Themes:
Microarray Time Series Explorer
Microarray Time Series Explorer
Microarray Time-series Explorer (MATSE) is a high quality interactive visualisation software application for the analysis of microarray time-course data.
- Links to R and the inclusion of clustering visualisations
- Multi-sample experiments linked in multiple views
- Visualisations that accommodate missing/null values in the data
- Storage and retrieval of selections, making it easier for biologists to share findings
- Visualisation of predefined gene groupings
- Import/export of gene groupings
- Sliders supporting common data queries (e.g. maximum fold change for a gene)
| Release Date: |
June, 2010 |
| Status: | |
| Availability: | |
| Data type: | |
| Techniques: | Scatterplot, Line graph, Coordinated views |
| Software: | |
| Technology: | Java |
| Platform: | |
| Requirements: | Java |
Project development
Institution:
IIDI
This tool was developed at the Institute for Informatics and Digital Innovation using a Scottish Enterprise grant (project reference number L/JR/POC/8-OET003). The intial concept for this time-series explorer was first investigated during the PhD work of P Craig. The concept was later expanded, improved and re-developed with a Scottish Enterprise grant, and partipation from active industrial partner firm and a number of academic bio-informaticians.
Last updated on 30th September, 2014
