Visualisation Tools

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This is a collection of many of the most notable visualisation tools produced by biologists and visualisation researchers. If you have a tool you would like to see here, please register and you will be able to add your visualisation tool to the site or contact us for more advice.

BioBlox
Molecular
Reactome
Pathway
XCluSim
Genome
Pan-Tetris
Genome
Biopython KGML module
Pathway
GenomeDiagram
Genome
MI-MatrixExplorer
Genome, Phylogenetics
Paramorama: visual parameter optimisation for biomedical image processing
Cells and Organisms
Orchestral
Genome
Leeds Virtual Microscope
Cell-o-pane: a cell lineage visualisation tool
Cells and Organisms, Molecular
FoldSynth
Molecular
Ensembl Genome Browser
Genome
Pathline
Pathway
Zomit
Genome
TreeJuxtaposer
Phylogenetics
Flapjack
Genome
MizBee
Genome
BioFabric
Pathway
GeneaQuilts
Populations
Circos
Genome
StratomeX
Genome
Miru (formerly known as BioLayout Express3D)
Cells and Organisms, Genome, Pathway
Assemble2
Molecular
UCSC Genome Browser
Genome
Voreen
Pathway
Polymerization Illustration
Molecular
Galaxy Track Browser
Genome
Physioillustration: Interactive molecular illustration
Anatomy Physiology and Atlases, Molecular
enRoute
Pathway
Dynamic Biomolecular Path Viz
Molecular
Epithelial Volume Viz
Anatomy Physiology and Atlases
Gene-RiViT
Genome, Populations
Electron Microscopy Visualisation
Anatomy Physiology and Atlases
GVF Alignment Viz
Genome, Molecular
COMBat
Genome
MoClo Planner
Genome, Molecular