Visualisation Tools

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This is a collection of many of the most notable visualisation tools produced by biologists and visualisation researchers. If you have a tool you would like to see here, please register and you will be able to add your visualisation tool to the site or contact us for more advice.

XCluSim
Genome
IBM UKSC history
Molecular
Biopython KGML module
Pathway
GenomeDiagram
Genome
MI-MatrixExplorer
Genome, Phylogenetics
Paramorama: visual parameter optimisation for biomedical image processing
Cells and Organisms
Orchestral
Genome
Leeds Virtual Microscope
Cell-o-pane: a cell lineage visualisation tool
Cells and Organisms, Molecular
FoldSynth
Molecular
Ensembl Genome Browser
Genome
Pathline
Pathway
Pipit
Genome
Gremlin
Genome
Flapjack
Genome
MizBee
Genome
GeneaQuilts
Populations
Circos
Genome
Miru (formerly known as BioLayout Express3D)
Cells and Organisms, Genome, Pathway
Assemble2
Molecular
MolViewer
Molecular
Polymerization Illustration
Molecular
OmicsVis
Molecular
Morphometric Visualisation
Anatomy Physiology and Atlases
NGS Overlap Searcher
Genome
Galaxy Track Browser
Genome
GPGPU-based Contour Surfaces
Molecular
enRoute
Pathway
Dynamic Biomolecular Path Viz
Molecular
Epithelial Volume Viz
Anatomy Physiology and Atlases
mzRepeat
Molecular
Gene-RiViT
Genome, Populations
Electron Microscopy Visualisation
Anatomy Physiology and Atlases
COMBat
Genome
MoClo Planner
Genome, Molecular